The official said “something caused DHS concern, but it's a very low threshold to trigger a warning like this.” The official spoke on condition of anonymity because he was not authorized to discuss the issue publicly.
Earlier this month Homeland Security warned airlines with flights to Russia to be on the lookout for explosive devices possibly hidden inside toothpaste.
The Transportation Security Administration then banned passengers from bringing any liquids in their carry-on luggage on nonstop flights from the U.S. to Russia.
That warning became public just days before the opening ceremonies of the Winter Olympics in Sochi.
It is unclear if the latest warning, first reported Wednesday by NBC News, is related to the earlier threats to Russia-bound flights.
Air passengers in the United States have had to take off their shoes at airport security checkpoints since shortly after Richard Reid tried to ignite explosives hidden in his shoes on a Miami-bound flight in late 2001.
Reid pleaded guilty to terrorism charges and is serving a life sentence.
The traveling public has grown increasingly impatient with expanding security checks at airports.
TSA in recent years has changed some security procedures to allow young children and passengers 75 and older to keep their shoes on.
The security agency has also launched a fee-based program that allows willing flyers to submit to background checks and avoid having to remove their shoes, jackets and small amounts of liquids packed in carry-on luggage.